prody.csb pitt.edu

ProDy Protein Dynamics and Sequence Analysis

Dynamics of p38 MAP kinase inferred from a structural ensemble using PCA is compared to intrinsic dynamics of the protein modeled using ANM. See PCA of X-ray structures. Workflow for comparative analysis of sequence evolution and structural dynamics is shown. See Evol Applications. Or Mol Biol Evol article. Results from comparative analysis of residue conservation, conformational mobility, and coevolutionary patterns for uracil-DNA glycosylase. See Mol Biol Evol article. VMD plugin. See NMWiz tutorial.
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ProDy Protein Dynamics and Sequence Analysis

DESCRIPTION

Dynamics of p38 MAP kinase inferred from a structural ensemble using PCA is compared to intrinsic dynamics of the protein modeled using ANM. See PCA of X-ray structures. Workflow for comparative analysis of sequence evolution and structural dynamics is shown. See Evol Applications. Or Mol Biol Evol article. Results from comparative analysis of residue conservation, conformational mobility, and coevolutionary patterns for uracil-DNA glycosylase. See Mol Biol Evol article. VMD plugin. See NMWiz tutorial.

PARSED CONTENT

The web site prody.csb.pitt.edu states the following, "Dynamics of p38 MAP kinase inferred from a structural ensemble using PCA is compared to intrinsic dynamics of the protein modeled using ANM." We noticed that the website said " See PCA of X-ray structures." It also said " Workflow for comparative analysis of sequence evolution and structural dynamics is shown. Or Mol Biol Evol article. Results from comparative analysis of residue conservation, conformational mobility, and coevolutionary patterns for uracil-DNA glycosylase. See Mol Biol Evol article."

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